Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 AA386476-201ENSMUST00000098781 1665 ntBASIC34.18■■■■□ 3.06
Pds5bQ4VA53 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Pds5bQ4VA53 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC34.18■■■■□ 3.06
Pds5bQ4VA53 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC34.18■■■■□ 3.06
Pds5bQ4VA53 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
Pds5bQ4VA53 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Gm6728-201ENSMUST00000178117 1065 ntBASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC34.16■■■■□ 3.06
Pds5bQ4VA53 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Gm15847-201ENSMUST00000121417 1065 ntBASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Alkbh1-212ENSMUST00000185301 408 ntBASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Pds5bQ4VA53 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Pds5bQ4VA53 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Pds5bQ4VA53 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Pds5bQ4VA53 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Pds5bQ4VA53 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC34.12■■■■□ 3.05
Pds5bQ4VA53 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC34.12■■■■□ 3.05
Pds5bQ4VA53 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Pds5bQ4VA53 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC34.1■■■■□ 3.05
Pds5bQ4VA53 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC34.1■■■■□ 3.05
Pds5bQ4VA53 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC34.1■■■■□ 3.05
Pds5bQ4VA53 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC34.1■■■■□ 3.05
Pds5bQ4VA53 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pds5bQ4VA53 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pds5bQ4VA53 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC34.09■■■■□ 3.05
Pds5bQ4VA53 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Pds5bQ4VA53 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Pds5bQ4VA53 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Pds5bQ4VA53 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Pds5bQ4VA53 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Pds5bQ4VA53 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC34.08■■■■□ 3.05
Pds5bQ4VA53 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC34.08■■■■□ 3.05
Pds5bQ4VA53 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC34.07■■■■□ 3.05
Pds5bQ4VA53 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC34.07■■■■□ 3.05
Pds5bQ4VA53 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC34.07■■■■□ 3.04
Pds5bQ4VA53 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.04
Pds5bQ4VA53 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Pds5bQ4VA53 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC34.06■■■■□ 3.04
Pds5bQ4VA53 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC34.06■■■■□ 3.04
Pds5bQ4VA53 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pds5bQ4VA53 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pds5bQ4VA53 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pds5bQ4VA53 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Gm13559-201ENSMUST00000120476 863 ntBASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Pds5bQ4VA53 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Gm30025-201ENSMUST00000218555 728 ntBASIC34.04■■■■□ 3.04
Pds5bQ4VA53 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC34.03■■■■□ 3.04
Pds5bQ4VA53 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC34.03■■■■□ 3.04
Pds5bQ4VA53 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Pds5bQ4VA53 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Pds5bQ4VA53 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Pds5bQ4VA53 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Pds5bQ4VA53 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC34.02■■■■□ 3.04
Pds5bQ4VA53 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Pds5bQ4VA53 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Pds5bQ4VA53 Gm6802-201ENSMUST00000167843 1983 ntBASIC34.02■■■■□ 3.04
Pds5bQ4VA53 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Pds5bQ4VA53 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Pds5bQ4VA53 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
Pds5bQ4VA53 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC34.01■■■■□ 3.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms