Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syne3Q4FZC9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syne3Q4FZC9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syne3Q4FZC9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syne3Q4FZC9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syne3Q4FZC9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syne3Q4FZC9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syne3Q4FZC9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Gm26833-201ENSMUST00000180899 440 ntBASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Syne3Q4FZC9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Smad6-203ENSMUST00000179458 273 ntBASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Serp2-204ENSMUST00000228055 705 ntBASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne3Q4FZC9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syne3Q4FZC9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Syne3Q4FZC9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.28■□□□□ 0.84
Syne3Q4FZC9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne3Q4FZC9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne3Q4FZC9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne3Q4FZC9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne3Q4FZC9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Gm11421-201ENSMUST00000122124 294 ntBASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.26■□□□□ 0.83
Syne3Q4FZC9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms