Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.7■□□□□ 0.74
Trim80Q3V061 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim80Q3V061 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim80Q3V061 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Trim80Q3V061 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim80Q3V061 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trim80Q3V061 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim80Q3V061 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim80Q3V061 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim80Q3V061 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim80Q3V061 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Trim80Q3V061 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.68■□□□□ 0.74
Trim80Q3V061 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.68■□□□□ 0.74
Trim80Q3V061 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim80Q3V061 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim80Q3V061 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Trim80Q3V061 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim80Q3V061 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim80Q3V061 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.67■□□□□ 0.74
Trim80Q3V061 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim80Q3V061 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim80Q3V061 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim80Q3V061 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim80Q3V061 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim80Q3V061 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim80Q3V061 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim80Q3V061 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim80Q3V061 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trim80Q3V061 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim80Q3V061 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Trim80Q3V061 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim80Q3V061 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim80Q3V061 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim80Q3V061 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim80Q3V061 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trim80Q3V061 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim80Q3V061 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim80Q3V061 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim80Q3V061 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim80Q3V061 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim80Q3V061 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim80Q3V061 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.63■□□□□ 0.73
Trim80Q3V061 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim80Q3V061 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim80Q3V061 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms