Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Arhgef40Q3UPH7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC28.71■■■□□ 2.19
Arhgef40Q3UPH7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Arhgef40Q3UPH7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Arhgef40Q3UPH7 Gm32699-201ENSMUST00000221728 1988 ntBASIC28.7■■■□□ 2.19
Arhgef40Q3UPH7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Arhgef40Q3UPH7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Arhgef40Q3UPH7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Arhgef40Q3UPH7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC28.69■■■□□ 2.18
Arhgef40Q3UPH7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Arhgef40Q3UPH7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Arhgef40Q3UPH7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.18
Arhgef40Q3UPH7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Arhgef40Q3UPH7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Arhgef40Q3UPH7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef40Q3UPH7 Gm13836-201ENSMUST00000121159 501 ntBASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Arhgef40Q3UPH7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Gm13509-201ENSMUST00000119733 1308 ntBASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Arhgef40Q3UPH7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
Arhgef40Q3UPH7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Arhgef40Q3UPH7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC28.64■■■□□ 2.17
Arhgef40Q3UPH7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Arhgef40Q3UPH7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef40Q3UPH7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef40Q3UPH7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
Arhgef40Q3UPH7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC28.62■■■□□ 2.17
Arhgef40Q3UPH7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef40Q3UPH7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef40Q3UPH7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef40Q3UPH7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Arhgef40Q3UPH7 Gm26971-201ENSMUST00000182423 1072 ntBASIC28.6■■■□□ 2.17
Arhgef40Q3UPH7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC28.6■■■□□ 2.17
Arhgef40Q3UPH7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Arhgef40Q3UPH7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Arhgef40Q3UPH7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Arhgef40Q3UPH7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Arhgef40Q3UPH7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Arhgef40Q3UPH7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Arhgef40Q3UPH7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
Arhgef40Q3UPH7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Arhgef40Q3UPH7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms