Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm9988-201ENSMUST00000069786 435 ntBASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nlrc4Q3UP24 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nlrc4Q3UP24 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.27■□□□□ 0.84
Nlrc4Q3UP24 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.27■□□□□ 0.83
Nlrc4Q3UP24 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.83
Nlrc4Q3UP24 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nlrc4Q3UP24 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nlrc4Q3UP24 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nlrc4Q3UP24 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nlrc4Q3UP24 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nlrc4Q3UP24 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Gm38205-201ENSMUST00000192243 258 ntBASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nlrc4Q3UP24 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nlrc4Q3UP24 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Golph3-202ENSMUST00000226517 2359 ntBASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Gm10033-202ENSMUST00000211874 928 ntBASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.22■□□□□ 0.83
Nlrc4Q3UP24 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Gm7860-201ENSMUST00000121190 879 ntBASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Gm42642-201ENSMUST00000200683 355 ntBASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nlrc4Q3UP24 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Gm13234-201ENSMUST00000120010 747 ntBASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Gm26571-201ENSMUST00000181399 666 ntBASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nlrc4Q3UP24 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nlrc4Q3UP24 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms