Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
Col5a2Q3U962 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col5a2Q3U962 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Col5a2Q3U962 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.08■■□□□ 1.28
Col5a2Q3U962 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 AA386476-201ENSMUST00000098781 1665 ntBASIC23.07■■□□□ 1.28
Col5a2Q3U962 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col5a2Q3U962 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col5a2Q3U962 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col5a2Q3U962 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col5a2Q3U962 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col5a2Q3U962 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col5a2Q3U962 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Gm18666-201ENSMUST00000190039 958 ntBASIC23.05■■□□□ 1.28
Col5a2Q3U962 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Col5a2Q3U962 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col5a2Q3U962 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col5a2Q3U962 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Col5a2Q3U962 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.03■■□□□ 1.28
Col5a2Q3U962 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.03■■□□□ 1.28
Col5a2Q3U962 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.03■■□□□ 1.28
Col5a2Q3U962 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col5a2Q3U962 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.01■■□□□ 1.27
Col5a2Q3U962 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Col5a2Q3U962 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Gm44549-201ENSMUST00000208351 577 ntBASIC23.01■■□□□ 1.27
Col5a2Q3U962 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.01■■□□□ 1.27
Col5a2Q3U962 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col5a2Q3U962 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 AC121577.1-201ENSMUST00000227302 707 ntBASIC23■■□□□ 1.27
Col5a2Q3U962 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Col5a2Q3U962 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Col5a2Q3U962 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms