Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shcbp1lQ3TTP0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shcbp1lQ3TTP0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shcbp1lQ3TTP0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shcbp1lQ3TTP0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shcbp1lQ3TTP0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Shcbp1lQ3TTP0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shcbp1lQ3TTP0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shcbp1lQ3TTP0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.24■□□□□ 0.67
Shcbp1lQ3TTP0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1lQ3TTP0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shcbp1lQ3TTP0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1lQ3TTP0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shcbp1lQ3TTP0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms