Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nhej1Q3KNJ2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Gm45102-201ENSMUST00000207427 857 ntBASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nhej1Q3KNJ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Serp2-204ENSMUST00000228055 705 ntBASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nhej1Q3KNJ2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Nhej1Q3KNJ2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nhej1Q3KNJ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Gm14117-201ENSMUST00000122417 843 ntBASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nhej1Q3KNJ2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nhej1Q3KNJ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.39■□□□□ 0.86
Nhej1Q3KNJ2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nhej1Q3KNJ2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nhej1Q3KNJ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nhej1Q3KNJ2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.39■□□□□ 0.85
Nhej1Q3KNJ2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nhej1Q3KNJ2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Rps24-207ENSMUST00000224568 714 ntBASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nhej1Q3KNJ2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nhej1Q3KNJ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nhej1Q3KNJ2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nhej1Q3KNJ2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms