Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC10.51□□□□□ -0.73
Ush2AQ2QI47 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm8587-201ENSMUST00000076538 843 ntBASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm13158-201ENSMUST00000122007 736 ntBASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Gm44549-201ENSMUST00000208351 577 ntBASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ush2AQ2QI47 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Gm17661-201ENSMUST00000170317 270 ntBASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Mzt1-203ENSMUST00000227948 952 ntBASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Gm24589-201ENSMUST00000116692 94 ntBASIC10.49□□□□□ -0.73
Ush2AQ2QI47 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ush2AQ2QI47 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.49□□□□□ -0.73
Ush2AQ2QI47 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Gm18669-201ENSMUST00000216049 778 ntBASIC10.48□□□□□ -0.73
Ush2AQ2QI47 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Gm43438-201ENSMUST00000198133 379 ntBASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ush2AQ2QI47 Gm42699-201ENSMUST00000198104 1657 ntBASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ush2AQ2QI47 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.46□□□□□ -0.74
Ush2AQ2QI47 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ush2AQ2QI47 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ush2AQ2QI47 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms