Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Gm4968-201ENSMUST00000071458 858 ntBASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pkd1l3Q2EG98 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Gm13534-201ENSMUST00000121169 513 ntBASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pkd1l3Q2EG98 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Gm6211-202ENSMUST00000167849 925 ntBASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Gm6420-201ENSMUST00000193885 723 ntBASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pkd1l3Q2EG98 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pkd1l3Q2EG98 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Mir5133-201ENSMUST00000174955 77 ntBASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Gm12441-201ENSMUST00000121806 588 ntBASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pkd1l3Q2EG98 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.21■□□□□ 0.34
Pkd1l3Q2EG98 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pkd1l3Q2EG98 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Gm7290-201ENSMUST00000104990 617 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Gm12918-201ENSMUST00000120234 636 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Gm15710-201ENSMUST00000121821 636 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Nespas-201ENSMUST00000143738 1083 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Gm5075-201ENSMUST00000196916 622 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pkd1l3Q2EG98 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkd1l3Q2EG98 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkd1l3Q2EG98 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pkd1l3Q2EG98 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms