Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smad5P97454 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.21■□□□□ 0.51
Smad5P97454 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smad5P97454 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.2■□□□□ 0.5
Smad5P97454 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Smad5P97454 AV356131-201ENSMUST00000206201 750 ntBASIC18.2■□□□□ 0.5
Smad5P97454 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smad5P97454 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad5P97454 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smad5P97454 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Smad5P97454 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.19■□□□□ 0.5
Smad5P97454 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smad5P97454 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smad5P97454 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.18■□□□□ 0.5
Smad5P97454 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.18■□□□□ 0.5
Smad5P97454 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smad5P97454 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smad5P97454 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
Smad5P97454 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smad5P97454 Gm42778-201ENSMUST00000199644 553 ntBASIC18.17■□□□□ 0.5
Smad5P97454 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad5P97454 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smad5P97454 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smad5P97454 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smad5P97454 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smad5P97454 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smad5P97454 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smad5P97454 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smad5P97454 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.15■□□□□ 0.5
Smad5P97454 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.15■□□□□ 0.5
Smad5P97454 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smad5P97454 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smad5P97454 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Smad5P97454 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Smad5P97454 Mir6236-201ENSMUST00000184437 123 ntBASIC18.14■□□□□ 0.49
Smad5P97454 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.14■□□□□ 0.49
Smad5P97454 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.14■□□□□ 0.49
Smad5P97454 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad5P97454 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smad5P97454 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad5P97454 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms