Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm15710-201ENSMUST00000121821 636 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Gm10653-202ENSMUST00000139570 835 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-1P97436 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.62■□□□□ 0.25
Nkx3-1P97436 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Gm5075-201ENSMUST00000196916 622 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-1P97436 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.62■□□□□ 0.25
Nkx3-1P97436 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-1P97436 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-1P97436 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-1P97436 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Nespas-201ENSMUST00000143738 1083 ntBASIC16.61■□□□□ 0.25
Nkx3-1P97436 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx3-1P97436 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.61■□□□□ 0.25
Nkx3-1P97436 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.61■□□□□ 0.25
Nkx3-1P97436 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Nkx3-1P97436 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.61■□□□□ 0.25
Nkx3-1P97436 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-1P97436 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Gm13148-201ENSMUST00000118892 745 ntBASIC16.6■□□□□ 0.25
Nkx3-1P97436 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.6■□□□□ 0.25
Nkx3-1P97436 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nkx3-1P97436 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Gm13534-201ENSMUST00000121169 513 ntBASIC16.59■□□□□ 0.25
Nkx3-1P97436 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Gm5408-201ENSMUST00000197998 747 ntBASIC16.59■□□□□ 0.25
Nkx3-1P97436 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-1P97436 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.59■□□□□ 0.25
Nkx3-1P97436 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx3-1P97436 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.58■□□□□ 0.24
Nkx3-1P97436 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-1P97436 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.57■□□□□ 0.24
Nkx3-1P97436 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.57■□□□□ 0.24
Nkx3-1P97436 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-1P97436 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-1P97436 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx3-1P97436 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx3-1P97436 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx3-1P97436 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Nkx3-1P97436 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms