Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h3bP84228 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h3bP84228 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hist1h3bP84228 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hist1h3bP84228 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hist1h3bP84228 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.83■□□□□ 0.28
Hist1h3bP84228 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hist1h3bP84228 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hist1h3bP84228 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hist1h3bP84228 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist1h3bP84228 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist1h3bP84228 Gm8493-201ENSMUST00000196881 489 ntBASIC16.81■□□□□ 0.28
Hist1h3bP84228 Gm6139-201ENSMUST00000079261 882 ntBASIC16.81■□□□□ 0.28
Hist1h3bP84228 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist1h3bP84228 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hist1h3bP84228 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.8■□□□□ 0.28
Hist1h3bP84228 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hist1h3bP84228 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.79■□□□□ 0.28
Hist1h3bP84228 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.79■□□□□ 0.28
Hist1h3bP84228 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hist1h3bP84228 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.78■□□□□ 0.28
Hist1h3bP84228 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hist1h3bP84228 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Gm45417-201ENSMUST00000209533 758 ntBASIC16.77■□□□□ 0.28
Hist1h3bP84228 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.77■□□□□ 0.28
Hist1h3bP84228 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.77■□□□□ 0.28
Hist1h3bP84228 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hist1h3bP84228 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hist1h3bP84228 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hist1h3bP84228 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hist1h3bP84228 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h3bP84228 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h3bP84228 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h3bP84228 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms