Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.14■□□□□ 0.33
SgcbP82349 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.14■□□□□ 0.33
SgcbP82349 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SgcbP82349 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SgcbP82349 Gm8495-201ENSMUST00000188740 694 ntBASIC17.13■□□□□ 0.33
SgcbP82349 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.13■□□□□ 0.33
SgcbP82349 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.13■□□□□ 0.33
SgcbP82349 Gm42778-201ENSMUST00000199644 553 ntBASIC17.13■□□□□ 0.33
SgcbP82349 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.13■□□□□ 0.33
SgcbP82349 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SgcbP82349 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.13■□□□□ 0.33
SgcbP82349 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SgcbP82349 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcbP82349 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.12■□□□□ 0.33
SgcbP82349 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.12■□□□□ 0.33
SgcbP82349 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcbP82349 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.11■□□□□ 0.33
SgcbP82349 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.11■□□□□ 0.33
SgcbP82349 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.11■□□□□ 0.33
SgcbP82349 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcbP82349 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgcbP82349 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgcbP82349 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SgcbP82349 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SgcbP82349 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.1■□□□□ 0.33
SgcbP82349 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
SgcbP82349 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SgcbP82349 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SgcbP82349 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcbP82349 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.09■□□□□ 0.33
SgcbP82349 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SgcbP82349 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcbP82349 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SgcbP82349 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcbP82349 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SgcbP82349 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcbP82349 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcbP82349 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcbP82349 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcbP82349 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SgcbP82349 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.08■□□□□ 0.32
SgcbP82349 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SgcbP82349 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcbP82349 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcbP82349 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcbP82349 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SgcbP82349 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms