Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sparcl1P70663 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sparcl1P70663 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sparcl1P70663 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.93■□□□□ 0.94
Sparcl1P70663 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.93■□□□□ 0.94
Sparcl1P70663 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.93■□□□□ 0.94
Sparcl1P70663 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.93■□□□□ 0.94
Sparcl1P70663 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sparcl1P70663 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sparcl1P70663 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sparcl1P70663 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sparcl1P70663 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.91■□□□□ 0.94
Sparcl1P70663 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sparcl1P70663 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sparcl1P70663 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sparcl1P70663 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.9■□□□□ 0.94
Sparcl1P70663 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Sparcl1P70663 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Sparcl1P70663 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.9■□□□□ 0.94
Sparcl1P70663 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.9■□□□□ 0.94
Sparcl1P70663 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sparcl1P70663 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Sparcl1P70663 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Sparcl1P70663 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sparcl1P70663 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Sparcl1P70663 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.89■□□□□ 0.94
Sparcl1P70663 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sparcl1P70663 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sparcl1P70663 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sparcl1P70663 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.89■□□□□ 0.93
Sparcl1P70663 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sparcl1P70663 Gm38205-201ENSMUST00000192243 258 ntBASIC20.89■□□□□ 0.93
Sparcl1P70663 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.89■□□□□ 0.93
Sparcl1P70663 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Sparcl1P70663 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sparcl1P70663 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.89■□□□□ 0.93
Sparcl1P70663 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sparcl1P70663 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.89■□□□□ 0.93
Sparcl1P70663 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sparcl1P70663 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sparcl1P70663 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sparcl1P70663 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sparcl1P70663 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sparcl1P70663 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms