Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gcm1P70348 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Gcm1P70348 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gcm1P70348 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.07■□□□□ 0.16
Gcm1P70348 Gm18671-201ENSMUST00000214826 683 ntBASIC16.07■□□□□ 0.16
Gcm1P70348 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.07■□□□□ 0.16
Gcm1P70348 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gcm1P70348 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gcm1P70348 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gcm1P70348 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Gcm1P70348 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.06■□□□□ 0.16
Gcm1P70348 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gcm1P70348 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Gcm1P70348 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gcm1P70348 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gcm1P70348 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gcm1P70348 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
Gcm1P70348 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gcm1P70348 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.05■□□□□ 0.16
Gcm1P70348 Gm42569-201ENSMUST00000200539 472 ntBASIC16.05■□□□□ 0.16
Gcm1P70348 Gm9988-201ENSMUST00000069786 435 ntBASIC16.05■□□□□ 0.16
Gcm1P70348 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gcm1P70348 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Gcm1P70348 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gcm1P70348 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Gcm1P70348 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.04■□□□□ 0.16
Gcm1P70348 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Gcm1P70348 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gcm1P70348 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gcm1P70348 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.04■□□□□ 0.16
Gcm1P70348 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.03■□□□□ 0.16
Gcm1P70348 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Gcm1P70348 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Gm10849-201ENSMUST00000100397 618 ntBASIC16.03■□□□□ 0.16
Gcm1P70348 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.03■□□□□ 0.16
Gcm1P70348 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.03■□□□□ 0.16
Gcm1P70348 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.03■□□□□ 0.16
Gcm1P70348 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Gcm1P70348 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gcm1P70348 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 AA386476-201ENSMUST00000098781 1665 ntBASIC16.02■□□□□ 0.16
Gcm1P70348 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.02■□□□□ 0.16
Gcm1P70348 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gcm1P70348 Gm26571-201ENSMUST00000181399 666 ntBASIC16.02■□□□□ 0.16
Gcm1P70348 Gm27405-201ENSMUST00000184201 112 ntBASIC16.02■□□□□ 0.16
Gcm1P70348 Gm7291-201ENSMUST00000199147 382 ntBASIC16.02■□□□□ 0.16
Gcm1P70348 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.02■□□□□ 0.16
Gcm1P70348 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.02■□□□□ 0.16
Gcm1P70348 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Gcm1P70348 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gcm1P70348 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gcm1P70348 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gcm1P70348 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gcm1P70348 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gcm1P70348 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Gcm1P70348 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gcm1P70348 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Gcm1P70348 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gcm1P70348 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.01■□□□□ 0.15
Gcm1P70348 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.01■□□□□ 0.15
Gcm1P70348 Gm10033-202ENSMUST00000211874 928 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms