Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vamp3P63024 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vamp3P63024 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vamp3P63024 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vamp3P63024 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vamp3P63024 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vamp3P63024 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Vamp3P63024 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.85□□□□□ -0.03
Vamp3P63024 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.85□□□□□ -0.03
Vamp3P63024 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.85□□□□□ -0.03
Vamp3P63024 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vamp3P63024 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.85□□□□□ -0.03
Vamp3P63024 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.84□□□□□ -0.03
Vamp3P63024 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vamp3P63024 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vamp3P63024 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.83□□□□□ -0.03
Vamp3P63024 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vamp3P63024 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vamp3P63024 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vamp3P63024 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vamp3P63024 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.83□□□□□ -0.04
Vamp3P63024 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vamp3P63024 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vamp3P63024 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vamp3P63024 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vamp3P63024 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vamp3P63024 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp3P63024 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vamp3P63024 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vamp3P63024 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Vamp3P63024 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp3P63024 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vamp3P63024 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.8□□□□□ -0.04
Vamp3P63024 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vamp3P63024 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.8□□□□□ -0.04
Vamp3P63024 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.8□□□□□ -0.04
Vamp3P63024 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Vamp3P63024 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp3P63024 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.8□□□□□ -0.04
Vamp3P63024 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Vamp3P63024 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp3P63024 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp3P63024 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp3P63024 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp3P63024 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms