Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Usp46P62069 Gm38205-201ENSMUST00000192243 258 ntBASIC20.08■□□□□ 0.81
Usp46P62069 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp46P62069 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp46P62069 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp46P62069 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.08■□□□□ 0.8
Usp46P62069 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp46P62069 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp46P62069 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp46P62069 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.07■□□□□ 0.8
Usp46P62069 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp46P62069 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp46P62069 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp46P62069 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp46P62069 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp46P62069 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.06■□□□□ 0.8
Usp46P62069 Gm44487-201ENSMUST00000205145 325 ntBASIC20.06■□□□□ 0.8
Usp46P62069 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp46P62069 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp46P62069 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp46P62069 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp46P62069 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp46P62069 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp46P62069 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp46P62069 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp46P62069 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp46P62069 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp46P62069 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp46P62069 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp46P62069 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp46P62069 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp46P62069 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp46P62069 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp46P62069 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp46P62069 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp46P62069 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp46P62069 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.02■□□□□ 0.8
Usp46P62069 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Usp46P62069 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp46P62069 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp46P62069 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp46P62069 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.02■□□□□ 0.79
Usp46P62069 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.02■□□□□ 0.79
Usp46P62069 Golph3-202ENSMUST00000226517 2359 ntBASIC20.01■□□□□ 0.79
Usp46P62069 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Gm13146-201ENSMUST00000118508 780 ntBASIC20.01■□□□□ 0.79
Usp46P62069 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp46P62069 Gm7514-201ENSMUST00000209475 934 ntBASIC20.01■□□□□ 0.79
Usp46P62069 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp46P62069 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp46P62069 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.01■□□□□ 0.79
Usp46P62069 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp46P62069 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Usp46P62069 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20■□□□□ 0.79
Usp46P62069 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20■□□□□ 0.79
Usp46P62069 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20■□□□□ 0.79
Usp46P62069 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Usp46P62069 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp46P62069 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp46P62069 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms