Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.64□□□□□ -0.23
Cks1bP61025 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cks1bP61025 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1bP61025 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.63□□□□□ -0.23
Cks1bP61025 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.63□□□□□ -0.23
Cks1bP61025 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cks1bP61025 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cks1bP61025 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cks1bP61025 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.63□□□□□ -0.23
Cks1bP61025 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1bP61025 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cks1bP61025 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.62□□□□□ -0.23
Cks1bP61025 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cks1bP61025 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.62□□□□□ -0.23
Cks1bP61025 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.62□□□□□ -0.23
Cks1bP61025 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1bP61025 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cks1bP61025 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.61□□□□□ -0.23
Cks1bP61025 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Golph3-205ENSMUST00000228671 2842 ntBASIC13.61□□□□□ -0.23
Cks1bP61025 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1bP61025 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cks1bP61025 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.6□□□□□ -0.23
Cks1bP61025 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Gm10420-201ENSMUST00000121713 882 ntBASIC13.6□□□□□ -0.23
Cks1bP61025 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.6□□□□□ -0.23
Cks1bP61025 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cks1bP61025 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1bP61025 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.6□□□□□ -0.23
Cks1bP61025 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cks1bP61025 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cks1bP61025 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Haglr-201ENSMUST00000100000 2085 ntBASIC13.59□□□□□ -0.23
Cks1bP61025 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cks1bP61025 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cks1bP61025 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms