Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.57■□□□□ 0.72
Tubgcp3P58854 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.57■□□□□ 0.72
Tubgcp3P58854 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.57■□□□□ 0.72
Tubgcp3P58854 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubgcp3P58854 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.56■□□□□ 0.72
Tubgcp3P58854 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.56■□□□□ 0.72
Tubgcp3P58854 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubgcp3P58854 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Gm8493-201ENSMUST00000196881 489 ntBASIC19.55■□□□□ 0.72
Tubgcp3P58854 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.55■□□□□ 0.72
Tubgcp3P58854 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.55■□□□□ 0.72
Tubgcp3P58854 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Tubgcp3P58854 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Tubgcp3P58854 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Gm43173-201ENSMUST00000202246 593 ntBASIC19.53■□□□□ 0.72
Tubgcp3P58854 Gm45417-201ENSMUST00000209533 758 ntBASIC19.53■□□□□ 0.72
Tubgcp3P58854 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubgcp3P58854 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Smad6-203ENSMUST00000179458 273 ntBASIC19.52■□□□□ 0.72
Tubgcp3P58854 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.52■□□□□ 0.72
Tubgcp3P58854 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubgcp3P58854 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tubgcp3P58854 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.51■□□□□ 0.71
Tubgcp3P58854 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubgcp3P58854 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubgcp3P58854 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Tubgcp3P58854 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubgcp3P58854 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms