Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn18P56857 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn18P56857 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cldn18P56857 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cldn18P56857 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn18P56857 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.23■□□□□ 0.35
Cldn18P56857 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cldn18P56857 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.23■□□□□ 0.35
Cldn18P56857 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.23■□□□□ 0.35
Cldn18P56857 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn18P56857 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldn18P56857 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Gm10493-201ENSMUST00000097270 612 ntBASIC17.22■□□□□ 0.35
Cldn18P56857 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn18P56857 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Cldn18P56857 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn18P56857 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldn18P56857 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn18P56857 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn18P56857 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cldn18P56857 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.21■□□□□ 0.35
Cldn18P56857 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Cldn18P56857 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldn18P56857 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn18P56857 Gm9988-201ENSMUST00000069786 435 ntBASIC17.21■□□□□ 0.35
Cldn18P56857 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn18P56857 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldn18P56857 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Cldn18P56857 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cldn18P56857 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.2■□□□□ 0.34
Cldn18P56857 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cldn18P56857 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cldn18P56857 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn18P56857 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cldn18P56857 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.19■□□□□ 0.34
Cldn18P56857 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cldn18P56857 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Gm18284-201ENSMUST00000172604 624 ntBASIC17.19■□□□□ 0.34
Cldn18P56857 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn18P56857 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn18P56857 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cldn18P56857 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.18■□□□□ 0.34
Cldn18P56857 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 Gm7860-201ENSMUST00000121190 879 ntBASIC17.18■□□□□ 0.34
Cldn18P56857 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.18■□□□□ 0.34
Cldn18P56857 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Cldn18P56857 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.18■□□□□ 0.34
Cldn18P56857 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.18■□□□□ 0.34
Cldn18P56857 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.18■□□□□ 0.34
Cldn18P56857 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn18P56857 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.17■□□□□ 0.34
Cldn18P56857 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Reep4-203ENSMUST00000226563 1444 ntBASIC17.17■□□□□ 0.34
Cldn18P56857 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldn18P56857 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldn18P56857 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldn18P56857 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn18P56857 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms