Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SmoP56726 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.38■□□□□ 0.69
SmoP56726 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.38■□□□□ 0.69
SmoP56726 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
SmoP56726 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SmoP56726 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SmoP56726 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SmoP56726 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
SmoP56726 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SmoP56726 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.36■□□□□ 0.69
SmoP56726 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SmoP56726 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SmoP56726 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SmoP56726 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SmoP56726 Gm37179-201ENSMUST00000194862 823 ntBASIC19.35■□□□□ 0.69
SmoP56726 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.35■□□□□ 0.69
SmoP56726 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SmoP56726 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SmoP56726 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SmoP56726 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SmoP56726 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SmoP56726 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.34■□□□□ 0.69
SmoP56726 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.34■□□□□ 0.69
SmoP56726 Gm7514-201ENSMUST00000209475 934 ntBASIC19.34■□□□□ 0.69
SmoP56726 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SmoP56726 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SmoP56726 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SmoP56726 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.33■□□□□ 0.68
SmoP56726 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SmoP56726 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.33■□□□□ 0.68
SmoP56726 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SmoP56726 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SmoP56726 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SmoP56726 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.32■□□□□ 0.68
SmoP56726 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SmoP56726 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.32■□□□□ 0.68
SmoP56726 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SmoP56726 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SmoP56726 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SmoP56726 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SmoP56726 Gm13534-201ENSMUST00000121169 513 ntBASIC19.3■□□□□ 0.68
SmoP56726 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SmoP56726 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms