Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NcanP55066 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Gm43799-201ENSMUST00000201845 579 ntBASIC20.52■□□□□ 0.88
NcanP55066 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NcanP55066 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.52■□□□□ 0.88
NcanP55066 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
NcanP55066 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
NcanP55066 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.51■□□□□ 0.87
NcanP55066 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NcanP55066 Gm18666-201ENSMUST00000190039 958 ntBASIC20.51■□□□□ 0.87
NcanP55066 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.51■□□□□ 0.87
NcanP55066 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NcanP55066 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NcanP55066 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NcanP55066 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.51■□□□□ 0.87
NcanP55066 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NcanP55066 Gm2399-201ENSMUST00000104944 225 ntBASIC20.5■□□□□ 0.87
NcanP55066 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NcanP55066 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NcanP55066 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NcanP55066 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NcanP55066 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NcanP55066 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NcanP55066 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NcanP55066 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
NcanP55066 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NcanP55066 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NcanP55066 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NcanP55066 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
NcanP55066 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NcanP55066 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NcanP55066 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.47■□□□□ 0.87
NcanP55066 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.47■□□□□ 0.87
NcanP55066 Gm6433-201ENSMUST00000118634 875 ntBASIC20.47■□□□□ 0.87
NcanP55066 Gm15378-201ENSMUST00000121894 207 ntBASIC20.47■□□□□ 0.87
NcanP55066 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NcanP55066 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.47■□□□□ 0.87
NcanP55066 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NcanP55066 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NcanP55066 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NcanP55066 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.46■□□□□ 0.87
NcanP55066 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NcanP55066 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NcanP55066 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NcanP55066 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NcanP55066 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.45■□□□□ 0.86
NcanP55066 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.45■□□□□ 0.86
NcanP55066 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.45■□□□□ 0.86
NcanP55066 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NcanP55066 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NcanP55066 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NcanP55066 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.44■□□□□ 0.86
NcanP55066 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NcanP55066 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Mir5122-201ENSMUST00000175004 89 ntBASIC20.44■□□□□ 0.86
NcanP55066 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.44■□□□□ 0.86
NcanP55066 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.44■□□□□ 0.86
NcanP55066 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.44■□□□□ 0.86
NcanP55066 Gm44549-201ENSMUST00000208351 577 ntBASIC20.44■□□□□ 0.86
NcanP55066 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NcanP55066 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms