Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs2P54869 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Hmgcs2P54869 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Hmgcs2P54869 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs2P54869 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.51■■□□□ 1.03
Hmgcs2P54869 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Trmt13-210ENSMUST00000198454 880 ntBASIC21.51■■□□□ 1.03
Hmgcs2P54869 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs2P54869 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs2P54869 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Rab3c-203ENSMUST00000224180 967 ntBASIC21.5■■□□□ 1.03
Hmgcs2P54869 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs2P54869 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.49■■□□□ 1.03
Hmgcs2P54869 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.49■■□□□ 1.03
Hmgcs2P54869 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Hmgcs2P54869 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hmgcs2P54869 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.46■■□□□ 1.03
Hmgcs2P54869 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Gm10812-201ENSMUST00000099864 546 ntBASIC21.46■■□□□ 1.03
Hmgcs2P54869 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs2P54869 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hmgcs2P54869 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hmgcs2P54869 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Hmgcs2P54869 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs2P54869 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs2P54869 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.43■■□□□ 1.02
Hmgcs2P54869 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms