Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.36■□□□□ 0.21
Hmga2P52927 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Hmga2P52927 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.36■□□□□ 0.21
Hmga2P52927 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hmga2P52927 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.35■□□□□ 0.21
Hmga2P52927 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hmga2P52927 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmga2P52927 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmga2P52927 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.34■□□□□ 0.21
Hmga2P52927 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.34■□□□□ 0.21
Hmga2P52927 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Hmga2P52927 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hmga2P52927 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmga2P52927 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmga2P52927 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmga2P52927 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Hmga2P52927 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmga2P52927 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.32■□□□□ 0.2
Hmga2P52927 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.32■□□□□ 0.2
Hmga2P52927 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga2P52927 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmga2P52927 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmga2P52927 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmga2P52927 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.31■□□□□ 0.2
Hmga2P52927 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga2P52927 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmga2P52927 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmga2P52927 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmga2P52927 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga2P52927 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.29■□□□□ 0.2
Hmga2P52927 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmga2P52927 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmga2P52927 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms