Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nek1P51954 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.39■■□□□ 1.01
Nek1P51954 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Nek1P51954 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.39■■□□□ 1.01
Nek1P51954 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.39■■□□□ 1.01
Nek1P51954 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.39■■□□□ 1.01
Nek1P51954 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nek1P51954 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Nek1P51954 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Nek1P51954 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Nek1P51954 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nek1P51954 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Nek1P51954 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
Nek1P51954 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nek1P51954 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Nek1P51954 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.38■■□□□ 1.01
Nek1P51954 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
Nek1P51954 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nek1P51954 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nek1P51954 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nek1P51954 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.38■■□□□ 1.01
Nek1P51954 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nek1P51954 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.37■■□□□ 1.01
Nek1P51954 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Gm8493-201ENSMUST00000196881 489 ntBASIC21.37■■□□□ 1.01
Nek1P51954 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nek1P51954 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
Nek1P51954 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nek1P51954 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.36■■□□□ 1.01
Nek1P51954 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nek1P51954 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.36■■□□□ 1.01
Nek1P51954 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.35■■□□□ 1.01
Nek1P51954 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nek1P51954 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nek1P51954 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nek1P51954 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nek1P51954 Gm29257-201ENSMUST00000186115 639 ntBASIC21.34■■□□□ 1.01
Nek1P51954 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nek1P51954 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nek1P51954 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nek1P51954 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Nek1P51954 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nek1P51954 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Nek1P51954 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nek1P51954 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nek1P51954 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nek1P51954 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Nek1P51954 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nek1P51954 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.32■■□□□ 1
Nek1P51954 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.32■■□□□ 1
Nek1P51954 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.32■■□□□ 1
Nek1P51954 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nek1P51954 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.31■■□□□ 1
Nek1P51954 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.31■■□□□ 1
Nek1P51954 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Nek1P51954 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nek1P51954 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms