Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CcnfP51944 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CcnfP51944 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.32■□□□□ 0.52
CcnfP51944 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CcnfP51944 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
CcnfP51944 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CcnfP51944 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.31■□□□□ 0.52
CcnfP51944 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CcnfP51944 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CcnfP51944 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CcnfP51944 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CcnfP51944 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnfP51944 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnfP51944 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CcnfP51944 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CcnfP51944 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CcnfP51944 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.29■□□□□ 0.52
CcnfP51944 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.29■□□□□ 0.52
CcnfP51944 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.29■□□□□ 0.52
CcnfP51944 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CcnfP51944 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CcnfP51944 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
CcnfP51944 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CcnfP51944 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.27■□□□□ 0.52
CcnfP51944 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CcnfP51944 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.27■□□□□ 0.52
CcnfP51944 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CcnfP51944 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CcnfP51944 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.27■□□□□ 0.51
CcnfP51944 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CcnfP51944 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CcnfP51944 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CcnfP51944 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.26■□□□□ 0.51
CcnfP51944 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.26■□□□□ 0.51
CcnfP51944 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.26■□□□□ 0.51
CcnfP51944 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.26■□□□□ 0.51
CcnfP51944 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CcnfP51944 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CcnfP51944 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Cap2-205ENSMUST00000225824 1634 ntBASIC18.25■□□□□ 0.51
CcnfP51944 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.25■□□□□ 0.51
CcnfP51944 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CcnfP51944 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CcnfP51944 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CcnfP51944 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CcnfP51944 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CcnfP51944 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CcnfP51944 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
CcnfP51944 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms