Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
SftpbP50405 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SftpbP50405 Golgb1-201ENSMUST00000023534 498 ntBASIC19.59■□□□□ 0.73
SftpbP50405 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.59■□□□□ 0.73
SftpbP50405 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SftpbP50405 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SftpbP50405 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SftpbP50405 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.58■□□□□ 0.72
SftpbP50405 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.58■□□□□ 0.72
SftpbP50405 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.58■□□□□ 0.72
SftpbP50405 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SftpbP50405 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SftpbP50405 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SftpbP50405 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.57■□□□□ 0.72
SftpbP50405 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.57■□□□□ 0.72
SftpbP50405 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SftpbP50405 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SftpbP50405 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SftpbP50405 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SftpbP50405 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.55■□□□□ 0.72
SftpbP50405 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SftpbP50405 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
SftpbP50405 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SftpbP50405 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.54■□□□□ 0.72
SftpbP50405 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.54■□□□□ 0.72
SftpbP50405 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.54■□□□□ 0.72
SftpbP50405 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.54■□□□□ 0.72
SftpbP50405 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
SftpbP50405 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SftpbP50405 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SftpbP50405 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SftpbP50405 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.53■□□□□ 0.72
SftpbP50405 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.53■□□□□ 0.72
SftpbP50405 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.53■□□□□ 0.72
SftpbP50405 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.53■□□□□ 0.72
SftpbP50405 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.53■□□□□ 0.72
SftpbP50405 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SftpbP50405 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SftpbP50405 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SftpbP50405 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SftpbP50405 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.52■□□□□ 0.72
SftpbP50405 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SftpbP50405 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SftpbP50405 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.52■□□□□ 0.71
SftpbP50405 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms