Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TgfaP48030 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.7■□□□□ 0.26
TgfaP48030 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TgfaP48030 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Gm7860-201ENSMUST00000121190 879 ntBASIC16.7■□□□□ 0.26
TgfaP48030 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TgfaP48030 Gm27275-201ENSMUST00000184318 272 ntBASIC16.7■□□□□ 0.26
TgfaP48030 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.7■□□□□ 0.26
TgfaP48030 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TgfaP48030 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TgfaP48030 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TgfaP48030 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TgfaP48030 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.7■□□□□ 0.26
TgfaP48030 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TgfaP48030 Gm12896-201ENSMUST00000118430 226 ntBASIC16.69■□□□□ 0.26
TgfaP48030 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TgfaP48030 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TgfaP48030 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TgfaP48030 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.68■□□□□ 0.26
TgfaP48030 Gm13836-201ENSMUST00000121159 501 ntBASIC16.68■□□□□ 0.26
TgfaP48030 Gm6576-201ENSMUST00000169678 883 ntBASIC16.68■□□□□ 0.26
TgfaP48030 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TgfaP48030 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TgfaP48030 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TgfaP48030 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.67■□□□□ 0.26
TgfaP48030 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TgfaP48030 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.67■□□□□ 0.26
TgfaP48030 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
TgfaP48030 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TgfaP48030 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TgfaP48030 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TgfaP48030 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
TgfaP48030 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.67■□□□□ 0.26
TgfaP48030 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TgfaP48030 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.66■□□□□ 0.26
TgfaP48030 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.66■□□□□ 0.26
TgfaP48030 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.66■□□□□ 0.26
TgfaP48030 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.66■□□□□ 0.26
TgfaP48030 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.66■□□□□ 0.26
TgfaP48030 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.66■□□□□ 0.26
TgfaP48030 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TgfaP48030 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.66■□□□□ 0.26
TgfaP48030 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.65■□□□□ 0.26
TgfaP48030 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TgfaP48030 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.65■□□□□ 0.26
TgfaP48030 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TgfaP48030 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.64■□□□□ 0.25
TgfaP48030 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TgfaP48030 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms