Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.44■□□□□ 0.54
Rph3aP47708 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.44■□□□□ 0.54
Rph3aP47708 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.44■□□□□ 0.54
Rph3aP47708 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rph3aP47708 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rph3aP47708 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rph3aP47708 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rph3aP47708 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rph3aP47708 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rph3aP47708 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Rph3aP47708 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rph3aP47708 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rph3aP47708 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.42■□□□□ 0.54
Rph3aP47708 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rph3aP47708 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.41■□□□□ 0.54
Rph3aP47708 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rph3aP47708 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.41■□□□□ 0.54
Rph3aP47708 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.41■□□□□ 0.54
Rph3aP47708 Gm40848-201ENSMUST00000221998 324 ntBASIC18.41■□□□□ 0.54
Rph3aP47708 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rph3aP47708 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.4■□□□□ 0.54
Rph3aP47708 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.4■□□□□ 0.54
Rph3aP47708 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rph3aP47708 Gm43060-201ENSMUST00000200621 289 ntBASIC18.4■□□□□ 0.54
Rph3aP47708 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.4■□□□□ 0.54
Rph3aP47708 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rph3aP47708 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rph3aP47708 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.39■□□□□ 0.53
Rph3aP47708 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rph3aP47708 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rph3aP47708 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.38■□□□□ 0.53
Rph3aP47708 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Rph3aP47708 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rph3aP47708 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rph3aP47708 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rph3aP47708 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rph3aP47708 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.37■□□□□ 0.53
Rph3aP47708 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.37■□□□□ 0.53
Rph3aP47708 Gm27801-201ENSMUST00000184174 223 ntBASIC18.37■□□□□ 0.53
Rph3aP47708 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms