Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Abca1P41233 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.86■□□□□ 0.13
Abca1P41233 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.85■□□□□ 0.13
Abca1P41233 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Abca1P41233 Gm6211-202ENSMUST00000167849 925 ntBASIC15.85■□□□□ 0.13
Abca1P41233 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.85■□□□□ 0.13
Abca1P41233 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.85■□□□□ 0.13
Abca1P41233 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.85■□□□□ 0.13
Abca1P41233 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.85■□□□□ 0.13
Abca1P41233 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.85■□□□□ 0.13
Abca1P41233 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.85■□□□□ 0.13
Abca1P41233 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Abca1P41233 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Abca1P41233 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Abca1P41233 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Abca1P41233 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca1P41233 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca1P41233 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.83■□□□□ 0.13
Abca1P41233 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Abca1P41233 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Abca1P41233 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca1P41233 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca1P41233 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Abca1P41233 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Abca1P41233 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Abca1P41233 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Abca1P41233 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.83■□□□□ 0.12
Abca1P41233 Gm20049-201ENSMUST00000219950 730 ntBASIC15.83■□□□□ 0.12
Abca1P41233 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Abca1P41233 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.82■□□□□ 0.12
Abca1P41233 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.82■□□□□ 0.12
Abca1P41233 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Abca1P41233 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Abca1P41233 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.82■□□□□ 0.12
Abca1P41233 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Abca1P41233 Gm8520-201ENSMUST00000186517 868 ntBASIC15.82■□□□□ 0.12
Abca1P41233 Gm37856-201ENSMUST00000191634 999 ntBASIC15.82■□□□□ 0.12
Abca1P41233 Gm5408-201ENSMUST00000197998 747 ntBASIC15.82■□□□□ 0.12
Abca1P41233 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca1P41233 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca1P41233 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.81■□□□□ 0.12
Abca1P41233 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms