Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox6P40645 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Sox6P40645 Golph3-205ENSMUST00000228671 2842 ntBASIC17.95■□□□□ 0.46
Sox6P40645 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sox6P40645 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.95■□□□□ 0.46
Sox6P40645 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.95■□□□□ 0.46
Sox6P40645 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sox6P40645 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox6P40645 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Sox6P40645 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Sox6P40645 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 Mir6236-201ENSMUST00000184437 123 ntBASIC17.94■□□□□ 0.46
Sox6P40645 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sox6P40645 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox6P40645 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox6P40645 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox6P40645 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox6P40645 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Sox6P40645 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox6P40645 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.92■□□□□ 0.46
Sox6P40645 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.92■□□□□ 0.46
Sox6P40645 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
Sox6P40645 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.92■□□□□ 0.46
Sox6P40645 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.92■□□□□ 0.46
Sox6P40645 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox6P40645 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sox6P40645 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Gm21956-201ENSMUST00000179946 522 ntBASIC17.91■□□□□ 0.46
Sox6P40645 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.91■□□□□ 0.46
Sox6P40645 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sox6P40645 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sox6P40645 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sox6P40645 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox6P40645 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sox6P40645 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sox6P40645 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sox6P40645 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sox6P40645 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox6P40645 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sox6P40645 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sox6P40645 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sox6P40645 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.89■□□□□ 0.45
Sox6P40645 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.89■□□□□ 0.45
Sox6P40645 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.89■□□□□ 0.45
Sox6P40645 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox6P40645 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms