Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd9P40240 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd9P40240 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.02■□□□□ 0.63
Cd9P40240 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.01■□□□□ 0.63
Cd9P40240 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cd9P40240 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Cd9P40240 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.01■□□□□ 0.63
Cd9P40240 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Cd9P40240 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.01■□□□□ 0.63
Cd9P40240 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd9P40240 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19■□□□□ 0.63
Cd9P40240 Gm14281-201ENSMUST00000121700 1294 ntBASIC19■□□□□ 0.63
Cd9P40240 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19■□□□□ 0.63
Cd9P40240 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cd9P40240 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19■□□□□ 0.63
Cd9P40240 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cd9P40240 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cd9P40240 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd9P40240 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Cd9P40240 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Gm7860-201ENSMUST00000121190 879 ntBASIC18.99■□□□□ 0.63
Cd9P40240 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Cd9P40240 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Iqck-206ENSMUST00000208658 2891 ntBASIC18.99■□□□□ 0.63
Cd9P40240 BC021767-201ENSMUST00000126387 1716 ntBASIC18.99■□□□□ 0.63
Cd9P40240 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd9P40240 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cd9P40240 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Cd9P40240 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd9P40240 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.98■□□□□ 0.63
Cd9P40240 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.98■□□□□ 0.63
Cd9P40240 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd9P40240 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.98■□□□□ 0.63
Cd9P40240 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.98■□□□□ 0.63
Cd9P40240 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cd9P40240 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd9P40240 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cd9P40240 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.97■□□□□ 0.63
Cd9P40240 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.97■□□□□ 0.63
Cd9P40240 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.97■□□□□ 0.63
Cd9P40240 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd9P40240 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd9P40240 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd9P40240 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.96■□□□□ 0.63
Cd9P40240 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.96■□□□□ 0.63
Cd9P40240 Gm40848-201ENSMUST00000221998 324 ntBASIC18.96■□□□□ 0.63
Cd9P40240 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd9P40240 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd9P40240 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cd9P40240 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd9P40240 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.96■□□□□ 0.63
Cd9P40240 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd9P40240 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cd9P40240 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd9P40240 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd9P40240 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd9P40240 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd9P40240 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cd9P40240 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd9P40240 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.95■□□□□ 0.62
Cd9P40240 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cd9P40240 Gm43060-201ENSMUST00000200621 289 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms