Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Mmp13P33435 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.6■□□□□ 0.73
Mmp13P33435 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.6■□□□□ 0.73
Mmp13P33435 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp13P33435 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Mmp13P33435 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Mmp13P33435 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.59■□□□□ 0.73
Mmp13P33435 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.59■□□□□ 0.73
Mmp13P33435 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Mmp13P33435 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.59■□□□□ 0.73
Mmp13P33435 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp13P33435 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp13P33435 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp13P33435 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.58■□□□□ 0.73
Mmp13P33435 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp13P33435 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp13P33435 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp13P33435 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.58■□□□□ 0.72
Mmp13P33435 Mir7075-201ENSMUST00000184187 82 ntBASIC19.58■□□□□ 0.72
Mmp13P33435 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Mmp13P33435 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp13P33435 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Mmp13P33435 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Mmp13P33435 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp13P33435 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp13P33435 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.57■□□□□ 0.72
Mmp13P33435 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Mmp13P33435 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.57■□□□□ 0.72
Mmp13P33435 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp13P33435 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Mmp13P33435 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp13P33435 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp13P33435 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.55■□□□□ 0.72
Mmp13P33435 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp13P33435 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp13P33435 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Mmp13P33435 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp13P33435 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Mmp13P33435 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Mmp13P33435 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Mmp13P33435 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
Mmp13P33435 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mmp13P33435 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Mmp13P33435 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mmp13P33435 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Mmp13P33435 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.54■□□□□ 0.72
Mmp13P33435 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp13P33435 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp13P33435 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.52■□□□□ 0.72
Mmp13P33435 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Mmp13P33435 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp13P33435 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms