Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccl6P27784 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccl6P27784 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccl6P27784 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccl6P27784 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccl6P27784 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl6P27784 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccl6P27784 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Ccl6P27784 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.91□□□□□ -0.02
Ccl6P27784 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Ccl6P27784 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccl6P27784 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl6P27784 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccl6P27784 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ccl6P27784 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ccl6P27784 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccl6P27784 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.9□□□□□ -0.02
Ccl6P27784 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.9□□□□□ -0.02
Ccl6P27784 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.9□□□□□ -0.02
Ccl6P27784 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccl6P27784 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccl6P27784 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl6P27784 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccl6P27784 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Gm8493-201ENSMUST00000196881 489 ntBASIC14.89□□□□□ -0.03
Ccl6P27784 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl6P27784 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccl6P27784 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.88□□□□□ -0.03
Ccl6P27784 Serp2-204ENSMUST00000228055 705 ntBASIC14.88□□□□□ -0.03
Ccl6P27784 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl6P27784 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccl6P27784 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.87□□□□□ -0.03
Ccl6P27784 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccl6P27784 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccl6P27784 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccl6P27784 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccl6P27784 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccl6P27784 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl6P27784 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms