Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.58■□□□□ 0.4
Hmgn1P18608 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hmgn1P18608 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmgn1P18608 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Hmgn1P18608 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn1P18608 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hmgn1P18608 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Hmgn1P18608 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Hmgn1P18608 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn1P18608 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Hmgn1P18608 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hmgn1P18608 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.55■□□□□ 0.4
Hmgn1P18608 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.55■□□□□ 0.4
Hmgn1P18608 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn1P18608 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn1P18608 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn1P18608 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Hmgn1P18608 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.54■□□□□ 0.4
Hmgn1P18608 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn1P18608 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.54■□□□□ 0.4
Hmgn1P18608 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.54■□□□□ 0.4
Hmgn1P18608 Gm7417-201ENSMUST00000192950 473 ntBASIC17.54■□□□□ 0.4
Hmgn1P18608 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgn1P18608 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn1P18608 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgn1P18608 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgn1P18608 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgn1P18608 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgn1P18608 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgn1P18608 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.52■□□□□ 0.4
Hmgn1P18608 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.52■□□□□ 0.4
Hmgn1P18608 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgn1P18608 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn1P18608 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgn1P18608 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn1P18608 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn1P18608 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgn1P18608 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Hmgn1P18608 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgn1P18608 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hmgn1P18608 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn1P18608 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn1P18608 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn1P18608 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.5■□□□□ 0.39
Hmgn1P18608 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn1P18608 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hmgn1P18608 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.5■□□□□ 0.39
Hmgn1P18608 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.5■□□□□ 0.39
Hmgn1P18608 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn1P18608 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgn1P18608 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms