Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntn1P12960 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cntn1P12960 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntn1P12960 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntn1P12960 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.43■□□□□ 0.54
Cntn1P12960 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.42■□□□□ 0.54
Cntn1P12960 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cntn1P12960 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.42■□□□□ 0.54
Cntn1P12960 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cntn1P12960 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cntn1P12960 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
Cntn1P12960 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntn1P12960 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
Cntn1P12960 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.41■□□□□ 0.54
Cntn1P12960 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.41■□□□□ 0.54
Cntn1P12960 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Cntn1P12960 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cntn1P12960 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.41■□□□□ 0.54
Cntn1P12960 Gm29257-201ENSMUST00000186115 639 ntBASIC18.41■□□□□ 0.54
Cntn1P12960 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.41■□□□□ 0.54
Cntn1P12960 Gm37179-201ENSMUST00000194862 823 ntBASIC18.41■□□□□ 0.54
Cntn1P12960 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cntn1P12960 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntn1P12960 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.4■□□□□ 0.54
Cntn1P12960 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.4■□□□□ 0.54
Cntn1P12960 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cntn1P12960 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.4■□□□□ 0.54
Cntn1P12960 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.4■□□□□ 0.54
Cntn1P12960 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cntn1P12960 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Cntn1P12960 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Gm38205-201ENSMUST00000192243 258 ntBASIC18.39■□□□□ 0.53
Cntn1P12960 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cntn1P12960 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cntn1P12960 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.38■□□□□ 0.53
Cntn1P12960 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cntn1P12960 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cntn1P12960 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cntn1P12960 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cntn1P12960 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cntn1P12960 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cntn1P12960 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cntn1P12960 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.37■□□□□ 0.53
Cntn1P12960 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.37■□□□□ 0.53
Cntn1P12960 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cntn1P12960 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cntn1P12960 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cntn1P12960 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cntn1P12960 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.37■□□□□ 0.53
Cntn1P12960 Iqck-206ENSMUST00000208658 2891 ntBASIC18.37■□□□□ 0.53
Cntn1P12960 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cntn1P12960 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cntn1P12960 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cntn1P12960 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cntn1P12960 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.36■□□□□ 0.53
Cntn1P12960 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cntn1P12960 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cntn1P12960 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.36■□□□□ 0.53
Cntn1P12960 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cntn1P12960 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms