Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sod1P08228 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.23■□□□□ 0.51
Sod1P08228 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Sod1P08228 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sod1P08228 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sod1P08228 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sod1P08228 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.22■□□□□ 0.51
Sod1P08228 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sod1P08228 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sod1P08228 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sod1P08228 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sod1P08228 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.21■□□□□ 0.51
Sod1P08228 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.21■□□□□ 0.51
Sod1P08228 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sod1P08228 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sod1P08228 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sod1P08228 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.21■□□□□ 0.51
Sod1P08228 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.21■□□□□ 0.5
Sod1P08228 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sod1P08228 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sod1P08228 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.2■□□□□ 0.5
Sod1P08228 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.2■□□□□ 0.5
Sod1P08228 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sod1P08228 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sod1P08228 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sod1P08228 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sod1P08228 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.19■□□□□ 0.5
Sod1P08228 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sod1P08228 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.19■□□□□ 0.5
Sod1P08228 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sod1P08228 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.19■□□□□ 0.5
Sod1P08228 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sod1P08228 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sod1P08228 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sod1P08228 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sod1P08228 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.18■□□□□ 0.5
Sod1P08228 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sod1P08228 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sod1P08228 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sod1P08228 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.17■□□□□ 0.5
Sod1P08228 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.17■□□□□ 0.5
Sod1P08228 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.17■□□□□ 0.5
Sod1P08228 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.17■□□□□ 0.5
Sod1P08228 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sod1P08228 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sod1P08228 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sod1P08228 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sod1P08228 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sod1P08228 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sod1P08228 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
Sod1P08228 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sod1P08228 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sod1P08228 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms