Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopeO89079 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CopeO89079 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CopeO89079 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.8■□□□□ 0.76
CopeO89079 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopeO89079 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CopeO89079 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.8■□□□□ 0.76
CopeO89079 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopeO89079 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CopeO89079 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CopeO89079 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CopeO89079 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CopeO89079 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopeO89079 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.79■□□□□ 0.76
CopeO89079 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CopeO89079 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.78■□□□□ 0.76
CopeO89079 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.78■□□□□ 0.76
CopeO89079 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CopeO89079 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CopeO89079 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CopeO89079 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.77■□□□□ 0.76
CopeO89079 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.77■□□□□ 0.76
CopeO89079 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopeO89079 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CopeO89079 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CopeO89079 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CopeO89079 BC021767-201ENSMUST00000126387 1716 ntBASIC19.76■□□□□ 0.75
CopeO89079 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopeO89079 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopeO89079 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopeO89079 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.75■□□□□ 0.75
CopeO89079 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CopeO89079 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopeO89079 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CopeO89079 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopeO89079 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.73■□□□□ 0.75
CopeO89079 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopeO89079 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopeO89079 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopeO89079 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.73■□□□□ 0.75
CopeO89079 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.73■□□□□ 0.75
CopeO89079 Gm22238-201ENSMUST00000175222 88 ntBASIC19.73■□□□□ 0.75
CopeO89079 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopeO89079 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.73■□□□□ 0.75
CopeO89079 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CopeO89079 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CopeO89079 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopeO89079 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CopeO89079 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CopeO89079 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms