Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.29■□□□□ 0.52
Hcn1O88704 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Hcn1O88704 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Hcn1O88704 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.29■□□□□ 0.52
Hcn1O88704 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn1O88704 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.28■□□□□ 0.52
Hcn1O88704 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Hcn1O88704 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.28■□□□□ 0.52
Hcn1O88704 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.28■□□□□ 0.52
Hcn1O88704 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Hcn1O88704 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Hcn1O88704 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcn1O88704 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hcn1O88704 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hcn1O88704 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hcn1O88704 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hcn1O88704 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Hcn1O88704 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Hcn1O88704 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Hcn1O88704 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hcn1O88704 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.27■□□□□ 0.52
Hcn1O88704 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcn1O88704 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcn1O88704 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcn1O88704 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcn1O88704 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hcn1O88704 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.26■□□□□ 0.51
Hcn1O88704 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hcn1O88704 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.26■□□□□ 0.51
Hcn1O88704 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcn1O88704 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Hcn1O88704 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.26■□□□□ 0.51
Hcn1O88704 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hcn1O88704 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcn1O88704 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hcn1O88704 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hcn1O88704 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.24■□□□□ 0.51
Hcn1O88704 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hcn1O88704 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hcn1O88704 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Hcn1O88704 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hcn1O88704 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.23■□□□□ 0.51
Hcn1O88704 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hcn1O88704 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hcn1O88704 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hcn1O88704 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn1O88704 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hcn1O88704 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn1O88704 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms