Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.65■□□□□ 0.42
Capns1O88456 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.65■□□□□ 0.42
Capns1O88456 Gm18284-201ENSMUST00000172604 624 ntBASIC17.65■□□□□ 0.42
Capns1O88456 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Capns1O88456 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Capns1O88456 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.65■□□□□ 0.42
Capns1O88456 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Capns1O88456 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Capns1O88456 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Capns1O88456 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Capns1O88456 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.64■□□□□ 0.41
Capns1O88456 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Capns1O88456 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Capns1O88456 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Capns1O88456 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Capns1O88456 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
Capns1O88456 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Mir6236-201ENSMUST00000184437 123 ntBASIC17.63■□□□□ 0.41
Capns1O88456 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Capns1O88456 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Capns1O88456 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Capns1O88456 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Capns1O88456 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.62■□□□□ 0.41
Capns1O88456 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Capns1O88456 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Capns1O88456 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capns1O88456 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.61■□□□□ 0.41
Capns1O88456 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capns1O88456 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Capns1O88456 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Capns1O88456 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Capns1O88456 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.61■□□□□ 0.41
Capns1O88456 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Capns1O88456 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Grk6-206ENSMUST00000224995 2971 ntBASIC17.6■□□□□ 0.41
Capns1O88456 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Capns1O88456 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.6■□□□□ 0.41
Capns1O88456 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Capns1O88456 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Capns1O88456 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Capns1O88456 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Capns1O88456 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms