Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tulp3O88413 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tulp3O88413 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tulp3O88413 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.89■□□□□ 0.46
Tulp3O88413 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tulp3O88413 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.89■□□□□ 0.45
Tulp3O88413 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tulp3O88413 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.89■□□□□ 0.45
Tulp3O88413 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tulp3O88413 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Tulp3O88413 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tulp3O88413 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Tulp3O88413 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.88■□□□□ 0.45
Tulp3O88413 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tulp3O88413 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tulp3O88413 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Tulp3O88413 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tulp3O88413 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Tulp3O88413 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tulp3O88413 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tulp3O88413 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tulp3O88413 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.86■□□□□ 0.45
Tulp3O88413 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.86■□□□□ 0.45
Tulp3O88413 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.86■□□□□ 0.45
Tulp3O88413 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tulp3O88413 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tulp3O88413 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tulp3O88413 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.86■□□□□ 0.45
Tulp3O88413 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.86■□□□□ 0.45
Tulp3O88413 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tulp3O88413 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.85■□□□□ 0.45
Tulp3O88413 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tulp3O88413 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Tulp3O88413 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Tulp3O88413 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tulp3O88413 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tulp3O88413 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.84■□□□□ 0.45
Tulp3O88413 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.84■□□□□ 0.45
Tulp3O88413 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tulp3O88413 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tulp3O88413 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tulp3O88413 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
Tulp3O88413 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.83■□□□□ 0.44
Tulp3O88413 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Tulp3O88413 Gm7417-201ENSMUST00000192950 473 ntBASIC17.83■□□□□ 0.44
Tulp3O88413 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.83■□□□□ 0.44
Tulp3O88413 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tulp3O88413 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tulp3O88413 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tulp3O88413 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tulp3O88413 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms