Protein–RNA interactions for Protein: O70572

Smpd2, Sphingomyelin phosphodiesterase 2, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd2O70572 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smpd2O70572 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.18■□□□□ 0.82
Smpd2O70572 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.18■□□□□ 0.82
Smpd2O70572 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smpd2O70572 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smpd2O70572 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smpd2O70572 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smpd2O70572 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smpd2O70572 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smpd2O70572 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.17■□□□□ 0.82
Smpd2O70572 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.17■□□□□ 0.82
Smpd2O70572 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.17■□□□□ 0.82
Smpd2O70572 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smpd2O70572 Gm2559-201ENSMUST00000201323 363 ntBASIC20.17■□□□□ 0.82
Smpd2O70572 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.17■□□□□ 0.82
Smpd2O70572 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smpd2O70572 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smpd2O70572 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smpd2O70572 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smpd2O70572 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.16■□□□□ 0.82
Smpd2O70572 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.16■□□□□ 0.82
Smpd2O70572 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.16■□□□□ 0.82
Smpd2O70572 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smpd2O70572 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smpd2O70572 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smpd2O70572 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smpd2O70572 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
Smpd2O70572 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.15■□□□□ 0.82
Smpd2O70572 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smpd2O70572 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.15■□□□□ 0.82
Smpd2O70572 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd2O70572 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.14■□□□□ 0.81
Smpd2O70572 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Smpd2O70572 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smpd2O70572 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Smpd2O70572 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smpd2O70572 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smpd2O70572 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.13■□□□□ 0.81
Smpd2O70572 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd2O70572 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Gm715-201ENSMUST00000117865 831 ntBASIC20.12■□□□□ 0.81
Smpd2O70572 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.12■□□□□ 0.81
Smpd2O70572 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Smpd2O70572 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.12■□□□□ 0.81
Smpd2O70572 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Smpd2O70572 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd2O70572 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smpd2O70572 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.11■□□□□ 0.81
Smpd2O70572 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Smpd2O70572 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.11■□□□□ 0.81
Smpd2O70572 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.11■□□□□ 0.81
Smpd2O70572 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Smpd2O70572 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd2O70572 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.11■□□□□ 0.81
Smpd2O70572 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd2O70572 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd2O70572 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd2O70572 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smpd2O70572 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms