Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr1O70481 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr1O70481 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr1O70481 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr1O70481 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Ubr1O70481 Gm8520-201ENSMUST00000186517 868 ntBASIC25.34■■□□□ 1.65
Ubr1O70481 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr1O70481 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC25.34■■□□□ 1.65
Ubr1O70481 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr1O70481 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC25.33■■□□□ 1.65
Ubr1O70481 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubr1O70481 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC25.33■■□□□ 1.65
Ubr1O70481 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.33■■□□□ 1.65
Ubr1O70481 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Ubr1O70481 Gm22240-201ENSMUST00000175225 82 ntBASIC25.33■■□□□ 1.65
Ubr1O70481 Gm44672-201ENSMUST00000206944 1098 ntBASIC25.33■■□□□ 1.65
Ubr1O70481 Gm10252-201ENSMUST00000209541 832 ntBASIC25.33■■□□□ 1.65
Ubr1O70481 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubr1O70481 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubr1O70481 Gm13509-201ENSMUST00000119733 1308 ntBASIC25.33■■□□□ 1.64
Ubr1O70481 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Ubr1O70481 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr1O70481 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC25.32■■□□□ 1.64
Ubr1O70481 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr1O70481 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr1O70481 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr1O70481 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC25.32■■□□□ 1.64
Ubr1O70481 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr1O70481 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC25.31■■□□□ 1.64
Ubr1O70481 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC25.31■■□□□ 1.64
Ubr1O70481 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr1O70481 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr1O70481 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr1O70481 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC25.31■■□□□ 1.64
Ubr1O70481 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr1O70481 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC25.31■■□□□ 1.64
Ubr1O70481 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC25.31■■□□□ 1.64
Ubr1O70481 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Ubr1O70481 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC25.3■■□□□ 1.64
Ubr1O70481 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Gm26971-201ENSMUST00000182423 1072 ntBASIC25.3■■□□□ 1.64
Ubr1O70481 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC25.3■■□□□ 1.64
Ubr1O70481 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ubr1O70481 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Ubr1O70481 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr1O70481 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr1O70481 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr1O70481 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr1O70481 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC25.29■■□□□ 1.64
Ubr1O70481 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr1O70481 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr1O70481 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr1O70481 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC25.28■■□□□ 1.64
Ubr1O70481 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr1O70481 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC25.28■■□□□ 1.64
Ubr1O70481 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr1O70481 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr1O70481 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr1O70481 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr1O70481 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Ubr1O70481 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr1O70481 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr1O70481 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ubr1O70481 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr1O70481 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr1O70481 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ubr1O70481 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr1O70481 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr1O70481 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr1O70481 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ubr1O70481 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr1O70481 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
Ubr1O70481 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr1O70481 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr1O70481 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Ubr1O70481 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC25.25■■□□□ 1.63
Ubr1O70481 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr1O70481 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr1O70481 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC25.24■■□□□ 1.63
Ubr1O70481 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC25.24■■□□□ 1.63
Ubr1O70481 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Ubr1O70481 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC25.24■■□□□ 1.63
Ubr1O70481 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr1O70481 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr1O70481 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC25.23■■□□□ 1.63
Ubr1O70481 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr1O70481 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr1O70481 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr1O70481 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ubr1O70481 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC25.23■■□□□ 1.63
Ubr1O70481 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms