Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.37■□□□□ 0.37
Alx3O70137 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.37■□□□□ 0.37
Alx3O70137 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.37■□□□□ 0.37
Alx3O70137 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.36■□□□□ 0.37
Alx3O70137 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.36■□□□□ 0.37
Alx3O70137 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Alx3O70137 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Alx3O70137 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Alx3O70137 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Alx3O70137 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.35■□□□□ 0.37
Alx3O70137 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Alx3O70137 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Alx3O70137 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.35■□□□□ 0.37
Alx3O70137 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
Alx3O70137 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Alx3O70137 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx3O70137 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Alx3O70137 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.34■□□□□ 0.37
Alx3O70137 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.34■□□□□ 0.37
Alx3O70137 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Alx3O70137 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Alx3O70137 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx3O70137 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Alx3O70137 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alx3O70137 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alx3O70137 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Alx3O70137 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alx3O70137 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Alx3O70137 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Alx3O70137 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.33■□□□□ 0.36
Alx3O70137 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx3O70137 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Alx3O70137 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Alx3O70137 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.32■□□□□ 0.36
Alx3O70137 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.32■□□□□ 0.36
Alx3O70137 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx3O70137 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx3O70137 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Alx3O70137 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Alx3O70137 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Alx3O70137 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms