Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cxcl13O55038 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cxcl13O55038 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.29■□□□□ 0.2
Cxcl13O55038 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cxcl13O55038 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Gm6420-201ENSMUST00000193885 723 ntBASIC16.28■□□□□ 0.2
Cxcl13O55038 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.28■□□□□ 0.2
Cxcl13O55038 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.28■□□□□ 0.2
Cxcl13O55038 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.28■□□□□ 0.2
Cxcl13O55038 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cxcl13O55038 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
Cxcl13O55038 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl13O55038 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl13O55038 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cxcl13O55038 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cxcl13O55038 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl13O55038 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Cxcl13O55038 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl13O55038 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cxcl13O55038 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.26■□□□□ 0.19
Cxcl13O55038 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.26■□□□□ 0.19
Cxcl13O55038 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.26■□□□□ 0.19
Cxcl13O55038 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
Cxcl13O55038 Nespas-201ENSMUST00000143738 1083 ntBASIC16.26■□□□□ 0.19
Cxcl13O55038 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cxcl13O55038 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Cxcl13O55038 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cxcl13O55038 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.26■□□□□ 0.19
Cxcl13O55038 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcl13O55038 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cxcl13O55038 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cxcl13O55038 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.25■□□□□ 0.19
Cxcl13O55038 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcl13O55038 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cxcl13O55038 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcl13O55038 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Cxcl13O55038 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cxcl13O55038 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cxcl13O55038 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cxcl13O55038 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Gm6365-201ENSMUST00000054711 744 ntBASIC16.23■□□□□ 0.19
Cxcl13O55038 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.23■□□□□ 0.19
Cxcl13O55038 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcl13O55038 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.22■□□□□ 0.19
Cxcl13O55038 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl13O55038 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.22■□□□□ 0.19
Cxcl13O55038 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl13O55038 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.22■□□□□ 0.19
Cxcl13O55038 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cxcl13O55038 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Cxcl13O55038 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cxcl13O55038 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcl13O55038 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms