Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf13O54965 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf13O54965 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf13O54965 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.37■□□□□ 0.37
Rnf13O54965 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.37■□□□□ 0.37
Rnf13O54965 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf13O54965 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Rnf13O54965 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf13O54965 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Rnf13O54965 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rnf13O54965 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.36■□□□□ 0.37
Rnf13O54965 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf13O54965 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.36■□□□□ 0.37
Rnf13O54965 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf13O54965 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf13O54965 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rnf13O54965 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf13O54965 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.35■□□□□ 0.37
Rnf13O54965 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf13O54965 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf13O54965 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Rnf13O54965 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Rnf13O54965 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf13O54965 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf13O54965 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf13O54965 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf13O54965 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf13O54965 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf13O54965 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf13O54965 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf13O54965 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Rnf13O54965 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf13O54965 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf13O54965 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf13O54965 BC021767-201ENSMUST00000126387 1716 ntBASIC17.33■□□□□ 0.36
Rnf13O54965 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rnf13O54965 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf13O54965 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf13O54965 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf13O54965 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf13O54965 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf13O54965 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.32■□□□□ 0.36
Rnf13O54965 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms