Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.52■□□□□ 0.72
Limk2O54785 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Limk2O54785 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Limk2O54785 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Limk2O54785 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Limk2O54785 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Limk2O54785 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Limk2O54785 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk2O54785 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Limk2O54785 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.51■□□□□ 0.71
Limk2O54785 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.51■□□□□ 0.71
Limk2O54785 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.51■□□□□ 0.71
Limk2O54785 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk2O54785 Golph3-202ENSMUST00000226517 2359 ntBASIC19.51■□□□□ 0.71
Limk2O54785 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Limk2O54785 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Limk2O54785 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Limk2O54785 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Limk2O54785 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.49■□□□□ 0.71
Limk2O54785 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.49■□□□□ 0.71
Limk2O54785 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Limk2O54785 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Limk2O54785 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Limk2O54785 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Limk2O54785 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Limk2O54785 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Limk2O54785 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.48■□□□□ 0.71
Limk2O54785 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Limk2O54785 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.48■□□□□ 0.71
Limk2O54785 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.47■□□□□ 0.71
Limk2O54785 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.47■□□□□ 0.71
Limk2O54785 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Limk2O54785 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Limk2O54785 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Limk2O54785 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.47■□□□□ 0.71
Limk2O54785 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Limk2O54785 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Limk2O54785 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Limk2O54785 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Limk2O54785 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.45■□□□□ 0.7
Limk2O54785 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.45■□□□□ 0.7
Limk2O54785 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Limk2O54785 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Limk2O54785 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Limk2O54785 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Limk2O54785 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Limk2O54785 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Limk2O54785 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Limk2O54785 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms