Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.97□□□□□ -0.01
Tnfsf11O35235 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.97□□□□□ -0.01
Tnfsf11O35235 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Cap2-205ENSMUST00000225824 1634 ntBASIC14.97□□□□□ -0.01
Tnfsf11O35235 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.97□□□□□ -0.01
Tnfsf11O35235 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfsf11O35235 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Tnfsf11O35235 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfsf11O35235 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfsf11O35235 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfsf11O35235 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.94□□□□□ -0.02
Tnfsf11O35235 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfsf11O35235 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.93□□□□□ -0.02
Tnfsf11O35235 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfsf11O35235 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.92□□□□□ -0.02
Tnfsf11O35235 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfsf11O35235 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms