Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf2O35218 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.44■□□□□ 0.86
Cpsf2O35218 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf2O35218 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cpsf2O35218 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf2O35218 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.42■□□□□ 0.86
Cpsf2O35218 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf2O35218 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf2O35218 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf2O35218 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf2O35218 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.42■□□□□ 0.86
Cpsf2O35218 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf2O35218 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Cpsf2O35218 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Cpsf2O35218 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf2O35218 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.4■□□□□ 0.86
Cpsf2O35218 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.4■□□□□ 0.86
Cpsf2O35218 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.4■□□□□ 0.86
Cpsf2O35218 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpsf2O35218 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.39■□□□□ 0.86
Cpsf2O35218 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf2O35218 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpsf2O35218 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cpsf2O35218 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf2O35218 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf2O35218 Serp2-204ENSMUST00000228055 705 ntBASIC20.39■□□□□ 0.85
Cpsf2O35218 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf2O35218 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf2O35218 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.39■□□□□ 0.85
Cpsf2O35218 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpsf2O35218 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf2O35218 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.38■□□□□ 0.85
Cpsf2O35218 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cpsf2O35218 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.38■□□□□ 0.85
Cpsf2O35218 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf2O35218 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cpsf2O35218 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Cpsf2O35218 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf2O35218 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf2O35218 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpsf2O35218 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.37■□□□□ 0.85
Cpsf2O35218 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cpsf2O35218 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf2O35218 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.37■□□□□ 0.85
Cpsf2O35218 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.37■□□□□ 0.85
Cpsf2O35218 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf2O35218 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf2O35218 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf2O35218 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpsf2O35218 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf2O35218 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf2O35218 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cpsf2O35218 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.36■□□□□ 0.85
Cpsf2O35218 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cpsf2O35218 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf2O35218 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.36■□□□□ 0.85
Cpsf2O35218 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cpsf2O35218 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf2O35218 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf2O35218 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.36■□□□□ 0.85
Cpsf2O35218 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.36■□□□□ 0.85
Cpsf2O35218 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.35■□□□□ 0.85
Cpsf2O35218 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.35■□□□□ 0.85
Cpsf2O35218 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms